I have Hostgator too but I'm shopping around for a new host because Kaktusan scripts don't work well there. I haven't had a problem with traffic scripts but probably because I haven't had enough traffic to get noticed. I did have a site that was shut down by them for a while because one gallery was getting too much traffic (4000 in one day - I don't think that's much traffic at all).
I don't know if I would have these problems on any shared server or if it is unique to Hostgator. They are otherwise reliable and respond quickly on support issues.
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